Package: tinyarray 2.4.2

Xiaojie Sun

tinyarray: Expression Data Analysis and Visualization

The Gene Expression Omnibus (<https://www.ncbi.nlm.nih.gov/geo/>) and The Cancer Genome Atlas (<https://portal.gdc.cancer.gov/>) are widely used medical public databases. Our platform integrates routine analysis and visualization tools for expression data to provide concise and intuitive data analysis and presentation.

Authors:Xiaojie Sun [aut, cre]

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Bug tracker:https://github.com/xjsun1221/tinyarray/issues

On CRAN:

48 exports 82 stars 3.93 score 188 dependencies 68 scripts 2.2k downloads

Last updated 3 months agofrom:e1b5df3066. Checks:OK: 7. Indexed: yes.

Exports:box_survcor.fullcor.onecorheatmapcorscatterplotdouble_enrichdraw_boxplotdraw_heatmapdraw_heatmap2draw_KMdraw_pcadraw_tsnedraw_venndraw_volcanodraw_volcano2dumdedges_to_nodesexp_boxplotexp_survfind_annogeo_downloadget_cgsget_count_txtget_degget_deg_allget_gpl_txtggheathypertestinteraction_to_edgesintersect_allmake_tcga_groupmatch_exp_clmulti_degmulti_deg_allplcortestplot_degpoint_cutquick_enrichrisk_plotsam_filtersurv_coxsurv_KMt_choosetrans_arraytrans_entrezexptrans_exptrans_exp_newunion_all

Dependencies:abindAnnotationDbiapeaplotaskpassbackportsbase64encBHBiobaseBiocGenericsBiocManagerBiocParallelBiostringsbitbit64blobbootbroombslibcachemcarcarDatacheckmatecliclusterclusterProfilercodetoolscolorspacecommonmarkcorrplotcowplotcpp11crayoncurldata.tableDBIDerivdigestdoByDOSEdplyrenrichplotevaluateexactRankTestsfansifarverfastmapfastmatchfgseafontawesomeforeignformatRFormulafsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataggforceggfunggnewscaleggplot2ggplotifyggpubrggraphggrepelggsciggsignifggtextggtreeglueGO.dbGOSemSimgraphlayoutsgridExtragridGraphicsgridtextgsongtablehighrHmischtmlTablehtmltoolshtmlwidgetshttrigraphIRangesisobandjpegjquerylibjsonliteKEGGRESTkm.ciKMsurvknitrlabelinglambda.rlatticelazyevallifecyclelimmalme4magrittrmarkdownMASSMatrixMatrixModelsmaxstatmemoisemgcvmicrobenchmarkmimeminqamodelrmunsellmvtnormnlmenloptrnnetnumDerivopensslpatchworkpbkrtestpheatmappillarpkgconfigplogrplyrpngpolyclippolynompurrrquantregqvalueR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppRcppArmadilloRcppEigenreshape2rlangrmarkdownrpartRSQLiterstatixrstudioapiS4VectorssassscalesscatterpieshadowtextsnowSparseMstatmodstringistringrsurvivalsurvminersurvMiscsyssystemfontstibbletidygraphtidyrtidyselecttidytreetinytextreeiotweenrUCSC.utilsutf8vctrsviridisviridisLitewithrxfunxml2xtableXVectoryamlyulab.utilszlibbioczoo