Package: tinyarray 2.4.2
Xiaojie Sun
tinyarray: Expression Data Analysis and Visualization
The Gene Expression Omnibus (<https://www.ncbi.nlm.nih.gov/geo/>) and The Cancer Genome Atlas (<https://portal.gdc.cancer.gov/>) are widely used medical public databases. Our platform integrates routine analysis and visualization tools for expression data to provide concise and intuitive data analysis and presentation.
Authors:
tinyarray_2.4.2.tar.gz
tinyarray_2.4.2.zip(r-4.5)tinyarray_2.4.2.zip(r-4.4)tinyarray_2.4.2.zip(r-4.3)
tinyarray_2.4.2.tgz(r-4.4-any)tinyarray_2.4.2.tgz(r-4.3-any)
tinyarray_2.4.2.tar.gz(r-4.5-noble)tinyarray_2.4.2.tar.gz(r-4.4-noble)
tinyarray_2.4.2.tgz(r-4.4-emscripten)tinyarray_2.4.2.tgz(r-4.3-emscripten)
tinyarray.pdf |tinyarray.html✨
tinyarray/json (API)
NEWS
| # Install 'tinyarray' in R: |
| install.packages('tinyarray', repos = c('https://xjsun1221.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/xjsun1221/tinyarray/issues
- cod - Cod
- deg - Deg
- deseq_data - Deseq_data
- exists_anno_list - Exists_anno_list
- exp_hub1 - Exp_hub1
- exprSet_hub1 - ExprSet_hub1
- genes - Genes
- lnc_anno - Lnc_anno
- lnc_annov23 - Lnc_annov23
- mRNA_anno - MRNA_anno
- mRNA_annov23 - MRNA_annov23
- meta1 - Meta1
- pkg_all - Pkg_all
Last updated 5 months agofrom:e1b5df3066. Checks:OK: 6 WARNING: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 10 2024 |
| R-4.5-win | OK | Nov 10 2024 |
| R-4.5-linux | WARNING | Nov 10 2024 |
| R-4.4-win | OK | Nov 10 2024 |
| R-4.4-mac | OK | Nov 10 2024 |
| R-4.3-win | OK | Nov 10 2024 |
| R-4.3-mac | OK | Nov 10 2024 |
Exports:box_survcor.fullcor.onecorheatmapcorscatterplotdouble_enrichdraw_boxplotdraw_heatmapdraw_heatmap2draw_KMdraw_pcadraw_tsnedraw_venndraw_volcanodraw_volcano2dumdedges_to_nodesexp_boxplotexp_survfind_annogeo_downloadget_cgsget_count_txtget_degget_deg_allget_gpl_txtggheathypertestinteraction_to_edgesintersect_allmake_tcga_groupmatch_exp_clmulti_degmulti_deg_allplcortestplot_degpoint_cutquick_enrichrisk_plotsam_filtersurv_coxsurv_KMt_choosetrans_arraytrans_entrezexptrans_exptrans_exp_newunion_all
Dependencies:abindAnnotationDbiapeaplotaskpassbackportsbase64encBHBiobaseBiocGenericsBiocManagerBiocParallelBiostringsbitbit64blobbootbroombslibcachemcarcarDatacheckmatecliclusterclusterProfilercodetoolscolorspacecommonmarkcorrplotcowplotcpp11crayoncurldata.tableDBIDerivdigestdoByDOSEdplyrenrichplotevaluateexactRankTestsfansifarverfastmapfastmatchfgseafontawesomeforeignformatRFormulafsfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataggforceggfunggnewscaleggplot2ggplotifyggpubrggrepelggsciggsignifggtangleggtextggtreeglueGO.dbGOSemSimgridExtragridGraphicsgridtextgsongtablehighrHmischtmlTablehtmltoolshtmlwidgetshttrigraphIRangesisobandjpegjquerylibjsonliteKEGGRESTkm.ciKMsurvknitrlabelinglambda.rlatticelazyevallifecyclelimmalme4magrittrmarkdownMASSMatrixMatrixModelsmaxstatmemoisemgcvmicrobenchmarkmimeminqamodelrmunsellmvtnormnlmenloptrnnetnumDerivopensslpatchworkpbkrtestpheatmappillarpkgconfigplogrplyrpngpolyclippolynompurrrquantregqvalueR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppRcppEigenreshape2rlangrmarkdownrpartRSQLiterstatixrstudioapiS4VectorssassscalesscatterpiesnowSparseMstatmodstringistringrsurvivalsurvminersurvMiscsyssystemfontstibbletidyrtidyselecttidytreetinytextreeiotweenrUCSC.utilsutf8vctrsviridisviridisLitewithrxfunxml2xtableXVectoryamlyulab.utilszlibbioczoo
